CDS

Accession Number TCMCG006C50434
gbkey CDS
Protein Id XP_013731333.2
Location complement(join(4907158..4907523,4907993..4908194,4908274..4908524,4908604..4908709,4908786..4908952,4909031..4909111,4909200..4909363,4909443..4909658,4909661..4909827,4909944..4910071,4910373..4910460,4910545..4910898,4911219..4911367))
Gene LOC106435023
GeneID 106435023
Organism Brassica napus

Protein

Length 813aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013875879.2
Definition LOW QUALITY PROTEIN: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description Cobalamin-independent synthase, Catalytic domain
KEGG_TC -
KEGG_Module M00017        [VIEW IN KEGG]
KEGG_Reaction R04405        [VIEW IN KEGG]
R09365        [VIEW IN KEGG]
KEGG_rclass RC00035        [VIEW IN KEGG]
RC00113        [VIEW IN KEGG]
RC01241        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00549        [VIEW IN KEGG]
EC 2.1.1.14        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00270        [VIEW IN KEGG]
ko00450        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00270        [VIEW IN KEGG]
map00450        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000096        [VIEW IN EMBL-EBI]
GO:0000097        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003871        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006555        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008172        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0008705        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009066        [VIEW IN EMBL-EBI]
GO:0009067        [VIEW IN EMBL-EBI]
GO:0009086        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0042084        [VIEW IN EMBL-EBI]
GO:0042085        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044272        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0050667        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTCAGCTCGCTCTTCAGAGAGTCTCGCCGTTGCCTTCGCTTCCAAGACGCCTTCCTTCTCTTCCGCCACCGTCTTCCTATTCTCCGTCTCTCCTTTTTGCAACCGCTTCTCGCCGTCCCCGCCGTCACGGATTCTACCTCGTCAGAGCAATGTCATCCCACATCGTCGGGTATCCCCGTATCGGACCCAAAAGAGAGCTCAAGTTTGCATTGGAGTCCTTCTGGGACGGGAAAACCGCTGCTAATGATTTGCAAACTGTTGCTGCTAACCTGAGAAACTCCATATGGAAACACATGGCTGATGCAGGGATCAAGTATATCCCCAGCAACACTTTTTCATACTATGACCAGATGTTGGATACAACAGCGATGCTTGGTGCTGTTCCGTCTAGATATGGTTGGAAAAATGGTGAGATTGGGTTTGATGTTTACTTCTCCATGGCTAGGGGAAACGATTCTGTTCCTGCTATGGAGATGACCAAGTGGTTTGATACAAACTACCATTACATTGTTCCTGAGTTGGGTCCTGATGTTGAATTCTCCTATGCATCTCACAAGGCTGTGGATGAATTTAAGGAGGCCAAAGCACTTGGCATTGACACAGTCCCCGTGCTCATTGGTCCCATGACCTACTTGCTACTCTCAAAACCAGCAAAGGGTGTTGATAAATCTTTCTGCCTTCTTTCTCTGATTGACAAGATTCTTCCCATCTACAAAGAAGTTTTTGATGATCTAAAATCTGCTGGCGCACGATGGATTCAGTTCGACGAGCCTATACTTGTGATGGATCTCGACACAAACCAATTACAGGCATTTTCGGATGCCTACTCTCACATGGAGTCATCTTTGGCGGGGTTGAATGTTCTTATCGCCACGTACTTCGTTGCTGAAGCGTACAAGACACTAACCTCGTTGAAGTGTGTAACCGGGTTTGGATTTGACTTCGTCCGTGGACTGGAGACTCTTGATTTGATCAAAGGGGGTTTTCCTCGTGGAAAGCTACTATTCGCTGGTGTTGTTGATGGAAGGAACATTTGGGCCAATGATCTTTCTGCTTCACTCAAGACACTACAGTCTCTTGAAGAGATTGTTGGCAAAGACAAAGTTGTAGTCTCTACTTCGTGCTCTCTGCTCCATACGGCTGTGGACTTGGTGAATGAAGTTAAACTTGATAAAGAACTCAAATCATGGCTTGCATTTGCTGCACAGAAGGTTGTTGAAGTTAATGCACTTGCTAAATCATTCTCTGGAGTTAAGGATGAGGCATTGTTTTCTTCTAATTCCATGGGACAAGCTTCTAGAAGATCATCTCCAAGGGTGACAAATGCCGCTGTACAGCAGGATGTTGCTGCAGTGAAGAAATCTGATCACCGCCGTTCTACAGAAGTAAGTGCTAGGCTACAAACCCAGCAGAAGAAGCTAAACCTCCCTGCTCTTCCAACAACTACAATTGGATCTTTTCCTCAGACCGCAGATCTCAGACGAATACGCAGAGAGTTCAAGGCCAAAAAGATATCAGATATTGACTATGTTCAGGCTATCAAAGTAGAATTTGAAAAGGTTATCAAGCTTCAGGAAGAGCTTGGGATTGATGTATTGGTGCATGGGGAGGCAGAGAGAAACGATATGGTGGAGTTTTTTGGTGAGCAGCTGTCTGGCTTTGCGTTCACATCAAACGGGTGGGTCCAATCGTACGGTTCCCGCTGTGTCAAGCCACCTATCATCTACGGTGATGTCACACGACCAAAGGCAATGACTGTCTTCTGGTCGTCAATGGCGCAGAAGATGACCCAACATCCTATGAAGGGGATGCTCACTGGCCCTGTTACAATTCTCAATTGGTCCTTTGTTAGAAATGACCAGCCCAGGCATGAGACGTGTTTTCAAATTGCACTTGCTATCAAAGATGAGGTGGAGGACCTTGAGAAGGCTGGTATCACTGTGATTCAGATTGATGAAGCTGCATTAAGAGAGGGGTTGCCGCTGAGGAGGTCCGAGCAAGAGTTTTACCTTGACTGGGCCGTTCACGCGTTCAGAATCACAAACTGTGATGTGCAAGACACTACTCAGATACACACTCACATGTGCTACTCAAATTTCAACGACATCATCCACTCAATCATAAACATGGATGCTGATGTGATCACTATTGAGAACTCACGTTCAGATGAGAAGCTCTTATCAGTCTTCCAAGAAGGAGTGAAATACTGTGCCGGAATCGGTCCAGGGGTTTATGACATCCACTCTCCTCGTATCCCATCCGCTGAAGAAATAGCTGAGCGTATCAACAAGATGCTTGCAGTTCTGGACAGCAAAGTCCTTTGGGTGAACCCTGACTGTGGCTTAAAGACGCGGAAGTACTCTGAAGTTAAATCCGCACTTAGCAACATGGTTGCTGCTGCCAAGCTAGTCCGCTCTGAGCTCATAAAGTCATAA
Protein:  
MGQLALQRVSPLPSLPRRLPSLPPPSSYSPSLLFATASRRPRRHGFYLVRAMSSHIVGYPRIGPKRELKFALESFWDGKTAANDLQTVAANLRNSIWKHMADAGIKYIPSNTFSYYDQMLDTTAMLGAVPSRYGWKNGEIGFDVYFSMARGNDSVPAMEMTKWFDTNYHYIVPELGPDVEFSYASHKAVDEFKEAKALGIDTVPVLIGPMTYLLLSKPAKGVDKSFCLLSLIDKILPIYKEVFDDLKSAGARWIQFDEPILVMDLDTNQLQAFSDAYSHMESSLAGLNVLIATYFAXAEAYKTLTSLKCVTGFGFDFVRGLETLDLIKGGFPRGKLLFAGVVDGRNIWANDLSASLKTLQSLEEIVGKDKVVVSTSCSLLHTAVDLVNEVKLDKELKSWLAFAAQKVVEVNALAKSFSGVKDEALFSSNSMGQASRRSSPRVTNAAVQQDVAAVKKSDHRRSTEVSARLQTQQKKLNLPALPTTTIGSFPQTADLRRIRREFKAKKISDIDYVQAIKVEFEKVIKLQEELGIDVLVHGEAERNDMVEFFGEQLSGFAFTSNGWVQSYGSRCVKPPIIYGDVTRPKAMTVFWSSMAQKMTQHPMKGMLTGPVTILNWSFVRNDQPRHETCFQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRRSEQEFYLDWAVHAFRITNCDVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFQEGVKYCAGIGPGVYDIHSPRIPSAEEIAERINKMLAVLDSKVLWVNPDCGLKTRKYSEVKSALSNMVAAAKLVRSELIKS